Qianben Wang

Overview:

Dr. Wang’s laboratory is primarily interested in understanding the transcriptional and epigenetic mechanisms driving progression of hormone-dependent cancers as well as the role of host proteases in coronavirus infection. His recent studies are designed to combine CRISPR/Cas13 technologies with nanotechnology to target undruggable transcription factors in cancers and host proteases for controlling SARS-CoV-2 infection.

Positions:

Professor of Pathology

Pathology
School of Medicine

Professor of Cell Biology

Cell Biology
School of Medicine

Member of the Duke Cancer Institute

Duke Cancer Institute
School of Medicine

Education:

Ph.D. 2002

University of Maryland, Baltimore

Postdoctoral Fellow/Instructor in Molecular and Cellular Oncology, Dana Farber Cancer Institute

Harvard Medical School

Grants:

Systems Analysis of Epigenomic Architecture in Cancer Progression (Project 2: Fine-scale nucleosome repositioning of enhancers for hormone-independent genomic function)

Administered By
Pathology
Role
Principal Investigator
Start Date
End Date

Role of oncogenic phosphorylated MED1 in aggressive prostate cancer

Administered By
Pathology
Awarded By
National Institutes of Health
Role
Principal Investigator
Start Date
End Date

Novel genomic mechanism for ligand-dependent transcription by androgen receptor

Administered By
Pathology
Awarded By
National Institutes of Health
Role
Principal Investigator
Start Date
End Date

Novel Tumor Suppressive Role of Phosphodiesterases in Prostate Cancer

Administered By
Pathology
Awarded By
Ohio State University
Role
Principal Investigator
Start Date
End Date

Population/single-cell profiling of chromatin accessibility for hormone-dependent cancers

Administered By
Pathology
Awarded By
University of Texas Health Science Center at San Antonio
Role
Principal Investigator
Start Date
End Date

Publications:

RB1-deficient prostate tumor growth and metastasis are vulnerable to ferroptosis induction via the E2F/ACSL4 axis.

Inactivation of the RB1 tumor suppressor gene is common in several types of therapy-resistant cancers, including metastatic castration-resistant prostate cancer, and predicts poor clinical outcomes. Effective therapeutic strategies against RB1-deficient cancers remain elusive. Here, we showed that RB1 loss/E2F activation sensitized cancer cells to ferroptosis, a form of regulated cell death driven by iron-dependent lipid peroxidation, by upregulating expression of ACSL4 and enriching ACSL4-dependent arachidonic acid-containing phospholipids, which are key components of ferroptosis execution. ACSL4 appeared to be a direct E2F target gene and was critical to RB1 loss-induced sensitization to ferroptosis. Importantly, using cell line-derived xenografts and genetically engineered tumor models, we demonstrated that induction of ferroptosis in vivo by JKE-1674, a highly selective and stable GPX4 inhibitor, blocked RB1-deficient prostate tumor growth and metastasis and led to improved survival of the mice. Thus, our findings uncover an RB/E2F/ACSL4 molecular axis that governs ferroptosis and also suggest a promising approach for the treatment of RB1-deficient malignancies.
Authors
Wang, M-E; Chen, J; Lu, Y; Bawcom, AR; Wu, J; Ou, J; Asara, JM; Armstrong, AJ; Wang, Q; Li, L; Wang, Y; Huang, J; Chen, M
MLA Citation
Wang, Mu-En, et al. “RB1-deficient prostate tumor growth and metastasis are vulnerable to ferroptosis induction via the E2F/ACSL4 axis.J Clin Invest, vol. 133, no. 10, May 2023. Pubmed, doi:10.1172/JCI166647.
URI
https://scholars.duke.edu/individual/pub1568926
PMID
36928314
Source
pubmed
Published In
J Clin Invest
Volume
133
Published Date
DOI
10.1172/JCI166647

SMAD3 promotes expression and activity of the androgen receptor in prostate cancer.

Overexpression of androgen receptor (AR) is the primary cause of castration-resistant prostate cancer, although mechanisms upregulating AR transcription in this context are not well understood. Our RNA-seq studies revealed that SMAD3 knockdown decreased levels of AR and AR target genes, whereas SMAD4 or SMAD2 knockdown had little or no effect. ChIP-seq analysis showed that SMAD3 knockdown decreased global binding of AR to chromatin. Mechanistically, we show that SMAD3 binds to intron 3 of the AR gene to promote AR expression. Targeting these binding sites by CRISPRi reduced transcript levels of AR and AR targets. In addition, ∼50% of AR and SMAD3 ChIP-seq peaks overlapped, and SMAD3 may also cooperate with or co-activate AR for AR target expression. Functionally, AR re-expression in SMAD3-knockdown cells partially rescued AR target expression and cell growth defects. The SMAD3 peak in AR intron 3 overlapped with H3K27ac ChIP-seq and ATAC-seq peaks in datasets of prostate cancer. AR and SMAD3 mRNAs were upregulated in datasets of metastatic prostate cancer and CRPC compared with primary prostate cancer. A SMAD3 PROTAC inhibitor reduced levels of AR, AR-V7 and AR targets in prostate cancer cells. This study suggests that SMAD3 could be targeted to inhibit AR in prostate cancer.
Authors
Jeon, H-Y; Pornour, M; Ryu, H; Khadka, S; Xu, R; Jang, J; Li, D; Chen, H; Hussain, A; Fazli, L; Gleave, M; Dong, X; Huang, F; Wang, Q; Barbieri, C; Qi, J
MLA Citation
Jeon, Hee-Young, et al. “SMAD3 promotes expression and activity of the androgen receptor in prostate cancer.Nucleic Acids Res, vol. 51, no. 6, Apr. 2023, pp. 2655–70. Pubmed, doi:10.1093/nar/gkad043.
URI
https://scholars.duke.edu/individual/pub1564959
PMID
36727462
Source
pubmed
Published In
Nucleic Acids Res
Volume
51
Published Date
Start Page
2655
End Page
2670
DOI
10.1093/nar/gkad043

Supplementary Table 1 from Shaping Chromatin States in Prostate Cancer by Pioneer Transcription Factors

<jats:p>&lt;p&gt;Supplementary Table 1&lt;/p&gt;</jats:p>
Authors
Hankey, W; Chen, Z; Wang, Q
MLA Citation
Hankey, William, et al. Supplementary Table 1 from Shaping Chromatin States in Prostate Cancer by Pioneer Transcription Factors. 31 Mar. 2023. Crossref, doi:10.1158/0008-5472.22423572.v1.
URI
https://scholars.duke.edu/individual/pub1571784
Source
crossref
Published Date
DOI
10.1158/0008-5472.22423572.v1

Data from Shaping Chromatin States in Prostate Cancer by Pioneer Transcription Factors

<jats:p>&lt;div&gt;Abstract&lt;p&gt;The androgen receptor (AR) is a critical therapeutic target in prostate cancer that responds to antagonists in primary disease, but inevitably becomes reactivated, signaling onset of the lethal castration-resistant prostate cancer (CRPC) stage. Epigenomic investigation of the chromatin environment and interacting partners required for AR transcriptional activity has uncovered three pioneer factors that open up chromatin and facilitate AR-driven transcriptional programs. FOXA1, HOXB13, and GATA2 are required for normal AR transcription in prostate epithelial development and for oncogenic AR transcription during prostate carcinogenesis. AR signaling is dependent upon these three pioneer factors both before and after the clinical transition from treatable androgen-dependent disease to untreatable CRPC. Agents targeting their respective DNA binding or downstream chromatin-remodeling events have shown promise in preclinical studies of CRPC. AR-independent functions of FOXA1, HOXB13, and GATA2 are emerging as well. While all three pioneer factors exert effects that promote carcinogenesis, some of their functions may inhibit certain stages of prostate cancer progression. In all, these pioneer factors represent some of the most promising potential therapeutic targets to emerge thus far from the study of the prostate cancer epigenome.&lt;/p&gt;&lt;/div&gt;</jats:p>
Authors
Hankey, W; Chen, Z; Wang, Q
MLA Citation
Hankey, William, et al. Data from Shaping Chromatin States in Prostate Cancer by Pioneer Transcription Factors. 31 Mar. 2023. Crossref, doi:10.1158/0008-5472.c.6511524.
URI
https://scholars.duke.edu/individual/pub1571785
Source
crossref
Published Date
DOI
10.1158/0008-5472.c.6511524

Data from Shaping Chromatin States in Prostate Cancer by Pioneer Transcription Factors

<jats:p>&lt;div&gt;Abstract&lt;p&gt;The androgen receptor (AR) is a critical therapeutic target in prostate cancer that responds to antagonists in primary disease, but inevitably becomes reactivated, signaling onset of the lethal castration-resistant prostate cancer (CRPC) stage. Epigenomic investigation of the chromatin environment and interacting partners required for AR transcriptional activity has uncovered three pioneer factors that open up chromatin and facilitate AR-driven transcriptional programs. FOXA1, HOXB13, and GATA2 are required for normal AR transcription in prostate epithelial development and for oncogenic AR transcription during prostate carcinogenesis. AR signaling is dependent upon these three pioneer factors both before and after the clinical transition from treatable androgen-dependent disease to untreatable CRPC. Agents targeting their respective DNA binding or downstream chromatin-remodeling events have shown promise in preclinical studies of CRPC. AR-independent functions of FOXA1, HOXB13, and GATA2 are emerging as well. While all three pioneer factors exert effects that promote carcinogenesis, some of their functions may inhibit certain stages of prostate cancer progression. In all, these pioneer factors represent some of the most promising potential therapeutic targets to emerge thus far from the study of the prostate cancer epigenome.&lt;/p&gt;&lt;/div&gt;</jats:p>
Authors
Hankey, W; Chen, Z; Wang, Q
MLA Citation
Hankey, William, et al. Data from Shaping Chromatin States in Prostate Cancer by Pioneer Transcription Factors. 31 Mar. 2023. Crossref, doi:10.1158/0008-5472.c.6511524.v1.
URI
https://scholars.duke.edu/individual/pub1571786
Source
crossref
Published Date
DOI
10.1158/0008-5472.c.6511524.v1