Upon His Retirement, Modrich Reflects on His Career
Published
From the Duke Cancer Institute archives. Content may be out of date.
Paul Modrich, PhD, James B. Duke Professor of Biochemistry, professor of Chemistry, and member of Duke Cancer Institute, came to Duke in 1976 — when Durham had a small-town feel, the smell of curing tobacco filled the air, and southern accents were the norm.
He grew up in rural New Mexico but had spent time in Boston (MIT for his undergrad and Harvard for his postdoc) and in California (Stanford for his PhD and UC Berkeley's Chemistry Department as an assistant professor for two years).
He was offered the Berkeley position as a graduate student, even though he wasn’t on the job market. Modrich accepted the offer for two reasons — his friend Jim Wang, PhD, who discovered the first DNA topoisomerase, was in the department, and like today, academic jobs were in short supply — but on the condition that he could complete his postdoc at Harvard; delaying the appointment for a year. Berkeley agreed.
Choosing Duke
Modrich hoped for a long-term career at Berkeley Chemistry, but it quickly became apparent that it was not the place for him. So, at the request of Bob Hill, PhD, then chair of Duke Biochemistry, he interviewed for a junior faculty position. Modrich was just 29 and had managed his lab at Berkeley for only one year.
Modrich was impressed by the science and feel of Duke’s Biochemistry Department — it had an intimacy and collegiality similar to what he experienced as a graduate student at Stanford. He was also impressed with the people he met there, including Hill, Bob Webster, PhD, Raj Rajagopalan, PhD, Irwin Fridovich, PhD, Bob Lefkowitz, MD, Bob Bell, PhD, David Richardson, PhD, Walter Guild, PhD, and Sam Gross, MD. When offered the position, he accepted.
Duke proved to be the ideal environment for Modrich’s career development. Duke Biochemistry had a strong reputation in research and research training in multiple areas. He was also fortunate to have excellent graduate students and postdocs come through his lab and to cement many friendships and research relationships in what he calls, “a very healthy environment.”
Most importantly, Modrich had the utmost respect for his colleagues and liked how they thought about their science in areas ranging from molecular biology and genetics to enzymology and structural biology. Modrich describes Duke Biochemistry as "my scientific home and the home of some of my closest friends for 46 years — and a place that allowed my research program to flourish.”
The Nobel
Modrich’s research at Duke emphasized the mechanisms used by enzymes that recognize and process rare sites in DNA. His early work on EcoRI restriction and modification enzymes, and the E. coli DNA adenine methylase clarified how these enzymes work and provided some of the first direct insight into how such enzymes search very long DNA molecules to locate the rare sites that they recognize.
Subsequent work in his laboratory addressed the nature and functions of DNA mismatch repair. Matthew Meselson's laboratory at Harvard had shown that mismatch repair functions as a copy editor in the bacterium E. coli to correct rare mistakes that occur during DNA replication. Modrich's lab identified the proteins and enzymes involved in E. coli mismatch repair and showed how it works. His lab also demonstrated that human cells have a similar mismatch repair system and showed that this pathway is defective in certain cancers, including those from patients with Lynch syndrome — an inherited cancer syndrome that increases cancer risk in a number of cancer types and the most common cause of hereditary colorectal cancer.
In 2015, Modrich (then a Howard Hughes Medical Institute-funded investigator, still based at Duke University School of Medicine), Tomas Lindahl FRS, FMedSci (Francis Crick Institute), and Aziz Sancar, MD, PhD (University of North Carolina at Chapel Hill), were jointly awarded the Nobel Prize in Chemistry "for mechanistic studies of DNA repair."
The three scientists, working independently, revealed how cells repair damaged DNA, which is vital knowledge about how a living cell functions. That knowledge is used for the development of new cancer treatments. Modrich demonstrated the mechanism of mismatch repair. Lindahl discovered the molecular machinery responsible for base excision repair, which repairs genetic damage that has little effect on DNA conformation; and Sancar mapped nucleotide excision repair, which repairs genetic lesions that distort DNA helix structure, like those produced by UV light from the sun. (People born with repair defects will develop skin cancer if they are exposed to sunlight.)
Mentorship and Legacy
Modrich's mentoring style emulated what he experienced as a student in Bob Lehman's lab at Stanford. As Modrich describes it, "Bob asked if I would like to work on the mechanism of DNA ligase. I said yes, and he let me decide what questions I would ask and how I would approach them experimentally, with occasional input from him and others in the lab." He adds, “This approach allows students, especially a less confident student like I was, to realize they can actually do the science themselves."
At its largest, Modrich had a working lab of 23 students, postdocs, and staff, but like all living things, labs have a life cycle. He says, "Scientific careers peak, and for the lucky few, that peak can last for decades. My lab was fortunate in that sense, but due to several health issues and the fact that I regarded our work over the last six years or so as largely incremental, it became clear to me that it was time to think about retirement. My wife Vickers (Burdett), who is also a scientist, and I discussed the possibility of retirement on multiple occasions, and a few years ago we decided that it was time."
He views the end of his career with mixed emotions. He ruminates, “I can do this one thing very well, but will my other interests be sufficient to keep me active?” Bob Lehman, PhD, once told him, "Paul, never retire." But Modrich disagrees. With a scarcity of faculty positions, he says, “It’s important for older scientists to wind down their labs to make way for the next generation.” Sage advice from someone who has received a multitude of scientific honors, including the Nobel Prize in Chemistry.
A Duke-led study published in iScience provides new insights into the tumor microenvironment of brain metastases, identifying distinct macrophage populations associated with patient survival and highlighting potential targets for future therapeutic intervention.Brain metastases remain a significant clinical challenge across multiple tumor types, including breast cancer, lung cancer, and melanoma. Despite advances in systemic therapies and local treatment approaches, outcomes remain poor for many patients, underscoring the need for a deeper understanding of the biological mechanisms driving disease progression.Using an integrated multi-omic approach, investigators analyzed 23 human brain metastasis specimens through single-nucleus RNA sequencing and spatial transcriptomic profiling. The study leveraged these complementary technologies to characterize cellular heterogeneity within the tumor microenvironment and define spatial relationships between immune and tumor cell populations.The analysis revealed substantial macrophage heterogeneity and demonstrated that macrophage-associated transcriptional programs differ significantly between patients with favorable and unfavorable survival outcomes. Specifically, inflammatory macrophage populations localized at the tumor boundary were associated with improved survival, while macrophage populations characterized by extracellular matrix remodeling signatures and TGFβ1 expression were associated with poorer outcomes.These findings suggest that distinct macrophage subtypes may play context-dependent roles in brain metastatic progression, functioning as either tumor-restrictive or tumor-supportive components of the microenvironment. The results further emphasize the importance of spatial cellular organization in shaping disease biology and clinical outcomes.Importantly, the study extends current understanding of immune-tumor interactions in brain metastases by linking specific macrophage subtypes and locations within the tumor ecosystem to survival-associated phenotypes. The identification of these distinct cellular programs may provide a framework for the development of novel therapeutic strategies aimed at modulating macrophage function or disrupting protumor signaling networks within the metastatic niche.As the incidence of brain metastases continues to increase and therapeutic resistance remains a critical barrier to long-term disease control, these findings represent an important step toward the development of more precise, microenvironment-directed treatment approaches. Further investigation will be needed to validate these observations and assess their translational potential in prospective clinical studies.This work was a joint research collaboration among DSBSM members: Dr. Ann Marie Pendergast (Department of Pharmacology and Cancer Biology, Duke University School of Medicine), Dr. Carey Anders (Department of Medicine, Division of Medical Oncology), and Dr. Simon Gregory (Department of Neurosurgery, and Duke Molecular Physiology Institute), and first-author Dr. Aaditya Khatri (Department of Medicine, Division of Pulmonary, Allergy and Critical Care Medicine, Duke University School of Medicine).
A Duke-led study published in iScience provides new insights into the tumor microenvironment of brain metastases, identifying distinct macrophage populations associated with patient survival and highlighting potential targets for future therapeutic intervention.Brain metastases remain a significant clinical challenge across multiple tumor types, including breast cancer, lung cancer, and melanoma. Despite advances in systemic therapies and local treatment approaches, outcomes remain poor for many patients, underscoring the need for a deeper understanding of the biological mechanisms driving disease progression.Using an integrated multi-omic approach, investigators analyzed 23 human brain metastasis specimens through single-nucleus RNA sequencing and spatial transcriptomic profiling. The study leveraged these complementary technologies to characterize cellular heterogeneity within the tumor microenvironment and define spatial relationships between immune and tumor cell populations.The analysis revealed substantial macrophage heterogeneity and demonstrated that macrophage-associated transcriptional programs differ significantly between patients with favorable and unfavorable survival outcomes. Specifically, inflammatory macrophage populations localized at the tumor boundary were associated with improved survival, while macrophage populations characterized by extracellular matrix remodeling signatures and TGFβ1 expression were associated with poorer outcomes.These findings suggest that distinct macrophage subtypes may play context-dependent roles in brain metastatic progression, functioning as either tumor-restrictive or tumor-supportive components of the microenvironment. The results further emphasize the importance of spatial cellular organization in shaping disease biology and clinical outcomes.Importantly, the study extends current understanding of immune-tumor interactions in brain metastases by linking specific macrophage subtypes and locations within the tumor ecosystem to survival-associated phenotypes. The identification of these distinct cellular programs may provide a framework for the development of novel therapeutic strategies aimed at modulating macrophage function or disrupting protumor signaling networks within the metastatic niche.As the incidence of brain metastases continues to increase and therapeutic resistance remains a critical barrier to long-term disease control, these findings represent an important step toward the development of more precise, microenvironment-directed treatment approaches. Further investigation will be needed to validate these observations and assess their translational potential in prospective clinical studies.This work was a joint research collaboration among DSBSM members: Dr. Ann Marie Pendergast (Department of Pharmacology and Cancer Biology, Duke University School of Medicine), Dr. Carey Anders (Department of Medicine, Division of Medical Oncology), and Dr. Simon Gregory (Department of Neurosurgery, and Duke Molecular Physiology Institute), and first-author Dr. Aaditya Khatri (Department of Medicine, Division of Pulmonary, Allergy and Critical Care Medicine, Duke University School of Medicine).